454 whole genome shotgun sequencing of genomic DNA library '454-577' ... - SRA

SRX005730: 454 whole genome shotgun sequencing of genomic DNA library '454-577' containing sample '37161657_G_8'
1 LS454 (454 GS FLX) run: 475 spots, 136,231 bases, 356,970b downloads

UUID: b6d869de-b102-441f-8df0-ac6b39925183

Design: 454 sequencing of Phytophthora infestans T30-4 via random selection

Submitted by: Broad Institute (BI)

Study: WGS sequencing and assembly project at the Broad Institute

PRJNA17665 • SRP000883 • All experiments • All runs

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The Broad Institute sequenced the genome of <i>Phytophthora infestans</i> strain T30-4 at 8X coverage using whole genome shotgun (WGS) sequencing. Assembly 1 consists of 18,288 contigs in 4,921 scaffolds. The genome assembly will undergo automated annotation.

Sample: Generic sample from Phytophthora infestans T30-4

SAMN00103133 • SRS003334 • All experiments • All runs

Organism: Phytophthora infestans T30-4

Library:

Name: 454-577

Instrument: 454 GS FLX

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

5 forward

Experiment attributes: (show all 4 attributes...) (hide...)

gssr_id: 17562.2

lsid: BROAD:SEQUENCING_SAMPLE:17562.2

material_type: Genomic DNA

project: L36011

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2007-12-06 11:08:42.0	454BaseCaller	1.1.02.15

Runs: 1 run, 475 spots, 136,231 bases, 356,970b

Run	# of Spots	# of Bases	Size	Published
SRR017700	475	136,231	356,970b	2009-06-24

ID:: 5989

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